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# GraphSAGE code
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## GraphSAGE: Inductive Representation Learning on Large Graphs
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## Overview
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#### Authors: [William Hamilton](http://stanford.edu/~wleif) (wleif@stanford.edu), [Rex Ying](http://joy-of-thinking.weebly.com/) (rexying@stanford.edu)
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#### [Project Website](http://snap.stanford.edu/graphsage/)
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### Overview
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This directory contains code necessary to run the GraphSAGE algorithm.
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See our paper for details on the algorithm: TODO arxiv link.
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The example_data subdirectory contains a small example of the PPI data,
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which includes 3 training networks + one validation network and one test network.
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The full Reddit and PPI datasets are available at: TODO
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The Web of Science data can be released to groups or individuals with valid WoS access licenses.
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The full Reddit and PPI datasets are available on the [project website](http://snap.stanford.edu/graphsage/).
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## Requirements
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If you make use of this code in your work, please cite the following paper:
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### Requirements
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Recent versions of TensorFlow, numpy, scipy, and networkx are required.
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## Running the code
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### Running the code
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The example_unsupervised.sh and example_supervised.sh files contain example usages of the code.
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(example_unsupervised.sh sets a very small max iteration number, which can be increased to improve performance.)
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* graphsage_seq -- GraphSAGE with LSTM-based aggregator
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* graphsage_pool -- GraphSAGE with max-pooling aggregator
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* gcn -- GraphSAGE with GCN-based aggregator
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* n2v -- an implementation of DeepWalk (called n2v for short everywhere)
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* n2v -- an implementation of [DeepWalk](https://arxiv.org/abs/1403.6652) (called n2v for short in the code.)
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Finally, a --base_log_dir should be specified (it defaults to the current directory).
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The output of the model and log files will be stored in a subdirectory of the base_log_dir.
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